P-15 Acquisition of new function through gene duplication in the metallocarboxypeptidase family
Presenter Status
Professor, Department of Biology
Second Presenter Status
Student, Department of Biology
Third Presenter Status
Student, Department of Biology
Preferred Session
Poster Session
Location
Buller Hall Hallways
Start Date
22-10-2021 2:00 PM
End Date
22-10-2021 3:00 PM
Presentation Abstract
Changes in the genetic code occur frequently through, for example, DNA breaks and recombination events, often leading to the duplication of genes. The M14 family of metallocarboxypeptidases suggests such a history of gene duplication. We investigated more recent duplication events in the M14 family of enzymes through analysis of genomic data found in the Ensembl genome database. Of the 23 M14 genes found in most vertebrates, four genes were present as two or more copies in many fish species. The AEBP1, CPXM1, and CPZ genes were duplicated in most fish with an arrangement consistent with a large-scale event such as whole-genome duplication. The CPO gene was also found duplicated in most fish species, but with copies tandemly arranged, suggestive of crossing-over errors. A close analysis of the synteny of these and nearby genes in Xenopus tropicalis suggested potential transposon-mediated duplication. Prediction of enzyme functions for the products of these genes showed that a greater amount of neofunctionalization was present in CPO paralogs as compared with other CPA/B enzymes; however, purifying selection to maintain function remained detectable. To further examine function of such CPO paralogs, the four paralogs found in Xenopus tropicalis were examined biochemically. All were expressed in HEK293T cells, but no enzymatic activity was detected. Nonetheless, subcellular distribution suggested a possible function on lipid droplets similar to that previously shown for human CPO.
P-15 Acquisition of new function through gene duplication in the metallocarboxypeptidase family
Buller Hall Hallways
Changes in the genetic code occur frequently through, for example, DNA breaks and recombination events, often leading to the duplication of genes. The M14 family of metallocarboxypeptidases suggests such a history of gene duplication. We investigated more recent duplication events in the M14 family of enzymes through analysis of genomic data found in the Ensembl genome database. Of the 23 M14 genes found in most vertebrates, four genes were present as two or more copies in many fish species. The AEBP1, CPXM1, and CPZ genes were duplicated in most fish with an arrangement consistent with a large-scale event such as whole-genome duplication. The CPO gene was also found duplicated in most fish species, but with copies tandemly arranged, suggestive of crossing-over errors. A close analysis of the synteny of these and nearby genes in Xenopus tropicalis suggested potential transposon-mediated duplication. Prediction of enzyme functions for the products of these genes showed that a greater amount of neofunctionalization was present in CPO paralogs as compared with other CPA/B enzymes; however, purifying selection to maintain function remained detectable. To further examine function of such CPO paralogs, the four paralogs found in Xenopus tropicalis were examined biochemically. All were expressed in HEK293T cells, but no enzymatic activity was detected. Nonetheless, subcellular distribution suggested a possible function on lipid droplets similar to that previously shown for human CPO.
Acknowledgments
Andrews University Faculty Research Grants